Wish List
From BioNetWiki
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Documentation
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Feature Requests
- Ability to suppress .cdat output. This is useful when only .gdat are of interest and .cdat files become extremely large.
- Zeroth order reactions.
- This is simple to do on a reaction by reaction basis, but it's tricky if a class of reaction can undergo a zeroth order reaction.
- Math expressions for parameters and observables.
- These will be preserved as assignment rules in the SBML output.
- Better handling of species/molecule creation.
- Parameter scanning.
- Parameter fitting.
- Link to NuSMV output.
- Allow bonds between Molecules, bypassing components.
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Items
- Allow whitespace to appear within molecules, patterns, and species.
- Check that allowed component state labels are compatible when mapping component states through the Label mechanism.
- Require that bonds are uniquely labelled across all patterns on one side of a reaction rule.
