Credits

From BioNetWiki

Michael L. Blinov <blinov@uchc.edu>

• Original author.
• Testing and development of new ideas.
• Developed interface to Virtual Cell.

James R. Faeder <faeder@pitt.edu>

• Primary BioNetGen developer since version 1.0.
• Testing and development of new ideas.
• Code maintainer.
• Current project co-PI.

William S. Hlavacek <wish@lanl.gov>

• Driving force in the development.
• Testing and development of new ideas.
• Current project PI.

Byron Goldstein <bxg@lanl.gov>

• Pioneered concept of signaling models based on multivalent interactions.
• Original project PI.

Justin Hogg <justinshogg@gmail.com>

• Primary developer of compartmental extension to BNGL.
• Revamped symmetry handling in patterns.

Michael Sneddon <michael.sneddon@yale.edu>

• Primary developer of NFsim code, a particle-based Gillespie simulator that takes BNG models as input.

Leonard Harris <lharris@pitt.edu>

• Author of paper describing compartmental extension to BNGL.

Jeremy Kozdon <jkozdon@stanford.edu>

• Code for use of sparse Jacobian in CVODE calls, which greatly accelerates ODE integration for large networks (sparse=>1 option).

Nathan Lemons <nlemons@gmail.com>

• HNauty code for canonical labeling of hierarchical graphs, which is (optionally) used in network generation,.

Matthew Fricke <matthew@gofigure.org>

• Primary author of RuleBuilder.

Leigh Fanning <leigh@verseira.net>

• Contributor to RuleBuilder development.
• Developed RuleBuilder help system.

Robert Seletsky <robert1unm@yahoo.com>

• Testing of BioNetGen and RuleBuilder.

Sarah Faeder <smgfaeder@gmail.com>

• Contributor of PhiBPlot.
• Testing and bug fixes for RuleBuilder.

Nikolay Borisov <nikolay.borisov@jefferson.edu>

• Primary developer of Macro module.
• Testing of BioNetGen.

Mikhail Kravchenko <krmisha@rambler.ru>

• Implementation of macro code.
• Streamlining of BioNetGen interface.

Alexander S. Chistopolsky <eroxi@savelovo.net>

• Developer of macro algorithm